Useful Commands

1. Functionalities

1.1. Ask for a computing node

sdev
sh_dev -p serc

1.2. Check the queue of your jobs

squeue -u bastudil
watch -n 2 squeue -u bastudil

squeue -p serc
squeue -p cee

sacctmgr --acount=bastudil
top

1.3. Cancel your jobs

scancel -u bastudil

1.4. Check the partitions you can use

sh_part

1.5. Check your team usage

squeue -A bsimpson -o "%.18i %.9P %.8j %.8u %.2t %.C %.L"

sacctmgr -show qos format=Name,MaxTRESPerUser,MaxSubmitJobsPerUser,MaxJobsPerUser,MaxTresPerAccount, MaxSubmitJobsPerAccount,MaxJobsPerAccount,MaxWal

1.6. Correct your .sh file.

Sometimes working in Windows and Linux will have formating issues.

# sudo apt install dos2unix  # On Debian/Ubuntu-based systems
# sudo yum install dos2unix  # On Red Hat-based systems
dos2unix <filename>

2. Other tips

2.1. Other modules for Sherlock

module load slurm
module load anaconda